GenBank Divisions

[aayush_005]

Traditional Divisions

BCT Bacterial/Archeal
INV Invertebrate
MAM Mammalian (ex. ROD/PRI)
PHG Phage
PLN Plant/Fungal
PRI Primate
ROD Rodent
SYN Synthetic (cloning vectors)
VRL Viral
VRT Other Vertebrate

Bulk Sequence Divisions

EST Expressed Sequence Tag

STS Sequence Tagged Site

GSS Genome Survey Sequence

HTGS High Throughput Genomic Sequence
HTC High Throughput cDNA

GI Number

The GI number is an identifier assigned to all sequences at the NCBI.

The GI number points to a specific version of a sequence record.

This identifier is largely superceded by the accession.version number for outside users.

GI stands for GenInfo, a database system at NCBI that preceded the Entrez system.

Accession Number

The accession number is the most general identifier used in the NCBI sequence databases.

This is the identifier that should be used when citing a database record in a publication.

The accession number points to a sequence record and does not change when the sequence is modified.

In the Entrez system, using the accession number as a query will retrieve the most recent version of the record.

The update history of a particular sequence record is tracked by the accession.version number.

Changes in version numbers occur only when the actual sequence of a record has been modified and do not reflect any changes in the annotation.

The specific version of a record is also tracked by another identifier that is mainly for internal NCBI use called the GI number

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